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Google Awards Competitive Grant to Tel Aviv University for COVID-19 Research

The grant is for high-impact research using Data Science and Artificial Intelligence (AI) to combat the coronavirus

Google.org, a Google fund aimed at supporting data based solutions for some of humanity’s greatest challenges, chose to award a competitive grant to Tel Aviv University for high-impact research employing Data Science and Artificial Intelligence (AI) to combat COVID-19. This step is one of many taken by Google in its ongoing effort to contribute to the global battle against the pandemic while also promoting its “AI for Social Good” research program – headed by, among others, Prof. Yossi Matias, Vice President at Google and CEO of the Research and Development Center at Google Israel. The Israeli center is a key player in Google’s endeavors to combat COVID-19, and also to help protect populations faced with natural disasters such as floods, earthquakes and wildfires.

The grant is being awarded to TAU’s AI and Data Science Center for research employing AI techniques and advanced statistical methods to improve COVID-19 public health measures. Using data from government ministries (Health, Transport, etc.) and the Israel Central Bureau of Statistics, the researchers intend to build an accurate high-resolution model of the spread of the pandemic and then use it to plan and test various methods for stopping infection. This interdisciplinary research brings together TAU scientists from the Porter School of the Environment and Earth Sciences, the School of Public Health, the Department of Statistics and Operations Research, the Blavatnik School of Computer Science, the School of Electrical Engineering, and the Gertner Institute for Epidemiology and Health Policy Research.

Prof. Meir Feder, Head of the AI and Data Science Center at Tel Aviv University: “We’re proud that Google has chosen to award this significant grant to our center in order to expand COVID-19 research in Israel. This grant will support the development of AI and Reinforcement Learning based tools for planning and examining the effects of different steps on the spread of the pandemic. The research findings will be used by decision-makers in their efforts to establish policies for stopping the pandemic.”

Featured image: Prof. Meir Feder, Head of the AI and Data Science Center at Tel Aviv University

The Texts From The Biblical-Period Fortress At Tel Arad Were Written By 12 Different Authors

The implication: Literacy in the kingdom of Judah was widespread

How many people in the Kingdom of Judah could read and write? And what does this say about the date of the composition of biblical texts like the Books of Kings? Researchers at Tel Aviv University used state-of-the-art image processing and machine learning technologies and collaborated with senior handwriting examiner to analyze 18 ancient texts from the Tel Arad military post dating back to around 600 BCE. They concluded that they were written by no fewer than 12 authors, a finding suggesting that many of the inhabitants of the kingdom of Judah during that period were able to read and write, with literacy not reserved as an exclusive domain in the hands of a few royal scribes.

Who wrote the books of Deuteronomy, Joshua, Judges, Samuel and Kings?

The special interdisciplinary study was conducted by Dr. Arie Shaus, Ms. Shira Faigenbaum-Golovin, and Dr. Barak Sober of the Department of Applied Mathematics, Prof. Eli Piasetzky of the Raymond and Beverly Sackler School of Physics and Astronomy, and Prof. Israel Finkelstein of the Jacob M. Alkow Department of Archeology and Ancient Near Eastern Civilizations. The forensic handwriting specialist is Ms. Yana Gerber, a senior expert who served for 27 years in the Questioned Documents Laboratory of Israel Police Division of Identification and Forensic Science, and in the police’s International Crime Investigations Unit. “There is a lively debate among experts as to whether the books of Deuteronomy, Joshua, Judges, Samuel and Kings were compiled in the last days of the kingdom of Judah, or after the destruction of the First Temple by the Babylonians,” explains Dr. Shaus. “One way to try to get to the bottom of this question is to ask when there was the potential for the writing of such complex historical works. For the period following the destruction of the First Temple in 586 BC, there is a very scant archaeological evidence of Hebrew writing in Jerusalem and its surroundings, whereas for the period preceding the destruction of the Temple, an abundance of written documents has been found. But then the question arises – who wrote these documents? Was this a society with widespread literacy, or was there just a handful of literate people?” To answer this question, the researchers examined the writings found in Tel Arad – ostraca (fragments of pottery vessels containing ink inscriptions) that were discovered at the Tel Arad site in the 1960s. Tel Arad was a small military post on the southern border of the kingdom of Judah; its built-up area was about two dunams and it housed between 20 and 30 soldiers. “We examined the question of literacy empirically, from different directions of image processing and machine learning,” says Ms. Faigenbaum-Golovin. “Among other things, these areas help us today with the identification, recognition and analysis of handwriting, signatures, and so on. The big challenge was to adapt modern technologies to 2,600-year-old ostraca. With a lot of effort, we were able to produce two algorithms that could compare letters and answer the question of whether two given ostraca were written by two different people.”

Police detective work following biblical texts

In 2016, the researchers published in Proceedings of the National Academy of Sciences of the United States of America (PNAS) that algorithmically, and with high statistical probability, 18 texts – the longest of the Tel Arad inscriptions – were written by at least four different authors. Combined with the textual evidence, the researchers concluded that there were in fact at least six different writers. The study aroused great interest around the world. Now, in an unprecedent move, the Tel Aviv University researchers have decided to compare the algorithmic methods, which have since been refined, to the forensic approach. To this end, Yana Gerber, a retired superintendent and senior questioned document examiner from the Israel Police Division of Identification and Forensic Science, joined the team. After an in-depth examination of the ancient inscriptions, Ms. Gerber found that the 18 texts were written by at least 12 distinct writers with varying degrees of certainty. Gerber examined the original Tel Arad ostraca at the Israel Museum, the Eretz Israel Museum, the Sonia and Marco Nedler Institute of Archaeology of Tel Aviv University, and the Israel Antiquities Authority’s warehouses at Beit Shemesh. “This study was very exciting, perhaps the most exciting in my professional career,” says Ms. Gerber. “These are ancient Hebrew inscriptions written in ink on shards of pottery, utilizing an alphabet that was previously unfamiliar to me. I studied the characteristics of the writing in order to analyze and compare the inscriptions, while benefitting from the skills and knowledge I acquired during my bachelor’s degree in classical archaeology and ancient Greek at Tel Aviv University. I delved into the microscopic details of these inscriptions written by people from the First Temple period, from routine issues such as orders concerning the movement of soldiers and the supply of wine, oil and flour, through correspondence with neighboring fortresses, to orders that reached the Tel Arad fortress from the high ranks of the Judahite military system. I had the feeling that the time stood still and there was no gap of 2,600 years between the writers of the ostraca and ourselves.”

Combining forces between the human eye and the algorithm

Gerber explains: “Handwriting is made up of unconscious habit patterns. The handwriting identification is based on the principle that these writing patterns are unique to each person and no two people write exactly alike. It is also assumed that repetitions of the same text or characters by the same writer are not exactly identical and one can define a range of natural handwriting variations specific to each one. Thus, the forensic handwriting analysis aims at tracking features corresponding to specific individuals, and concluding whether a single or rather different authors wrote the given documents. The examination process is divided into three steps: analysis, comparison, and evaluation. The analysis includes a detailed examination of every single inscription, according various features, such as the spacing between letters, their proportions, slant, etc. The comparison is based upon the aforementioned features across various handwritings. In addition, consistent patterns, common for different inscriptions, are identified i.e., the same combinations of letters, words, punctuation, etc. Finally, an evaluation of identicalness or distinctiveness of the writers is made.   It should be noted that according to an Israel Supreme Court ruling, a person can be convicted of a crime based on the opinion of a forensic handwriting expert.” Says Dr. Shaus: “We were in for a big surprise: Yana identified more authors than our algorithms did. It must be understood that currently, our algorithms are of a “cautious” nature – they know how to identify cases in which the texts were written by people with significantly different writing; in other cases they refrain from definite conclusions.  Contrastingly, an expert in handwriting analysis knows not only how to spot the differences between writers more accurately, but in some cases may also arrive at the conclusion that several texts were actually written by a single person. Naturally, in terms of consequences, it is very interesting to see who the authors are. Thanks to the findings, we were able to construct an entire flowchart of the correspondence concerning the military fortress – who wrote to whom and regarding what matter”. This reflects the chain of command within the Judahite army. “For example, in the area of ​​Arad, close to the border between the kingdoms of Judah and Edom, there was a military force whose soldiers are referred to as “Kittiyim” in the inscriptions, most likely Greek mercenaries. Someone, probably their Judahite commander or liaison officer, requested provisions for the Kittiyim unit. He writes to the quartermaster of the fortress in Arad ‘give the Kittiyim flour, bread, wine’ and so on. Now, thanks to the identification of the handwriting, we can say with high probability that there was not only one Judahite commander writing, but at least four different ones. It is conceivable that each time another officer was sent to join the patrol – they took turns.”

Literary education in the Kingdom of Judah

According to the researchers, the findings shed new light on Judahite society on the eve of the destruction of the First Temple – and on the setting of the compilation of biblical texts. “It should be remembered that this was a small outpost, one of a series of outposts on the southern border of the kingdom of Judah,” says Dr. Sober. “Since we found at least 12 different authors out of 18 texts in total, we can conclude that there was a high level of literacy throughout the entire kingdom. The commanding ranks and liaison officers at the outpost, and even the quartermaster Eliashib and his deputy, Nahum, were literate. Someone had to teach them how to read and write, so we must assume the existence of an appropriate educational system in Judah at the end of the First Temple period. This, of course, does not mean that there was almost universal literacy as there is today, but it seems that significant portions of the residents of the kingdom of Judah were literate. This is important to the discussion on the composition of biblical texts. If there were only two or three people in the whole kingdom who could read and write, then it is unlikely that complex texts would have been composed.” “Whoever wrote the biblical works did not do so for us, so that we could read them after 2,600 years, they did so in order to promote the ideological messages of the time,” Prof. Finkelstein says. “There are different opinions regarding the date of the composition of biblical texts. Some scholars suggest that many of the historical texts in the Bible – from Joshua to II Kings – were written at the end of the 7th century BC, that is, very close to the period of the Arad ostraca. It is important to ask who these texts were written for. According to one view, there were events in which the few people who could read and write stood before the illiterate public and read texts out to them. A high literacy rate in Judah puts things into a different light.” Prof. Finkelstein adds: “Until now, the discussion of literacy in the kingdom of Judah has been based on circular arguments, that is, on what is written within the Bible itself, for example on scribes in the kingdom. We have shifted the discussion to an empirical perspective. If in a remote place like Tel Arad there was, over a short period of time, a minimum of 12 authors of 18 inscriptions, out of the population of Judah which is estimated to have been no more than 120,000 people, it means that literacy was not the exclusive domain of a handful of royal scribes in Jerusalem. The quartermaster from the Tel Arad outpost also had the ability to read and appreciate them.” Featured image: Hebrew ostraca from Arad

TAU Joint Study: COVID-19 Deaths Dive on Weekends

TAU Economics Prof. Neil Gandal and his brother of CCNY find one city that defies trend: New York City

Tel Aviv University’s Prof. Neil Gandal from Berglas School of Economics, together with his brother Prof. Keith Gandal from City College of New York, examined U.S. COVID-19 deaths by day of the week. Mysteriously, the same pattern has repeated every single week of the pandemic: deaths rise from Tuesday-Friday and come down Saturday-Monday, hitting a nadir on Sunday or Monday. Controlling for time trends, deaths during weekends were at least 40 percent lower than on weekdays.

According to the researchers, the average death toll from COVID-19 in the U.S. has been 901 deaths on Saturdays, 682 on Sundays, and 699 on Mondays. The Sunday-Monday average then sharply rises on Tuesdays to 1,119. Wednesdays are the worst in terms of COVID-19, with an average of 1,130 deaths – nearly 95 percent higher than your average Sunday and almost 90 percent higher than your average Monday. Then, on Thursdays, the daily average begins to go down again with 1,128 deaths, followed by 1,033 deaths on Fridays.

This weekend effect does not occur in New York City. Without New York City, deaths during the Tuesday to Friday period in the U.S. are 50 percent higher than the Saturday to Monday period.

The same effect was found in COVID-19 mortality rates for the rest of the world – though much weaker; there is a 20 percent less chance of dying from the disease on weekends than on weekdays globally. Historical research shows that such a weekend effect exists for overall deaths, but it is weaker than with COVID-19. In the case of England, for example, researchers found that for every 100 deaths among patients in a hospital on Wednesday, there are 92 deaths among similar patients in the hospital on a Sunday. 

“The robustness analyses we did, and the fact that the weekend effect does not exist in NYC, suggest that our results are not likely due just to reporting issues,” says Prof. Neil Gandal. “It seems to us probable that something social or cultural is going on with overall U.S. COVID-19 deaths, corresponding to differing behaviors and attitudes tied to different parts of the week. Perhaps people tend to relax more on the weekends, even in hospitals or long-term care facilities. Meanwhile, in NYC, my brother Keith tells me, the familiar rhythms of the American week were simply wiped away between mid-March and the end of May. During that period, every day seemed the same, as in the movie ‘Groundhog Day.’ Except it was Coronavirus Day. Each day, you woke up to disbelief, dread, even horror, and soon enough, you heard the wail of ambulances. All day long, no one was on the streets. Even Times Square was empty. The sirens didn’t stop at night. Could worrying, watching the frightening news coverage of the pandemic, and ultimately panicking about COVID-19, be increasing the death toll? We leave this for future research.”

Targeting Melanoma

TAU researchers create a nanocarrier that selectively delivers two medications and releases them simultaneously at the malignant target

Researchers at Tel Aviv University, led by Prof. Ronit Satchi-Fainaro from the Department of Physiology and Pharmacology at the  Sackler Faculty of Medicine, developed an innovative nanotechnological drug delivery system that significantly enhances the effectiveness of treatment for the aggressive skin cancer melanoma. The nanocarrier is a biocompatible and biodegradable polymer, which comprises repeating units of glutamic acids (PGA- polyglutamic acid), packaging together two biological drugs belonging to different families with proven efficacy for the treatment of melanoma: BRAF inhibitors (Dabrafenib) and MEK inhibitors (Selumetinib, approved for use in children with NF1 – neurofibromatosis type I).

Prof. Satchi-Fainaro: “One of the major obstacles of the biological treatments is that after a while, the cancer cells develop resistance to the drugs. We assume that by precise delivery of two or more targeted drugs that will attack the cancer cells forcefully and simultaneously from different directions, we can delay or even prevent the acquisition of this drug-resistance.”

The research group included PhD students Evgeni Pisarevsky, Dr. Rachel Blau and Yana Epshtein from Prof. Satchi-Fainaro’s research laboratory at TAU’s Sackler School of Medicine. The paper was published as the cover article of the August 2020 issue of Advanced Therapeutics.

Prof. Satchi-Fainaro: “In this project, we looked for a solution to a problem often associated with drug cocktails: Today, most oncological treatments are administered in the form of cocktails of several medications; However, despite the fact that all drugs are administered to the patient simultaneously, they do not reach the tumor at the same time, due to differences in basic parameters – like how long they survive in the bloodstream (i.e. half-life), and the time it takes each drug to reach the tumor tissue. Thus, in most cases, the medications do not work concurrently, which prevents them from attaining optimal synergistic activity.”

Responding to these challenges, the researchers developed an innovative, efficient and biodegradable drug delivery system. Two biological drugs, known to be effective for the treatment of melanoma, Dabrafenib and Selumetinib, (inhibiting two different components – BRAF and MEK respectively – in the biological pathway which is over-activated in melanoma), were chosen, with the intention of delivering them jointly to the tumor by using a nanocarrier. The drug nanocarrier chosen for the task was PGA, a polymer of glutamic acid – one of nature’s most common amino acids. Developed in Prof. Satchi-Fainaro’s lab several years ago, the nanocarrier has already been tested successfully for treating pancreatic, breast and ovarian cancer in animal models.

In search of an optimal ratio

First, the researchers determined the optimal ratio between the two medications – based on levels and types of toxicity, as well as the resistance mechanism developed by cancer cells for each medication – to ultimately ensure maximum effectiveness, minimal toxicity and optimal synergistic activity. Another important advantage of joint delivery is reduced dosage: a much lower dose is required compared to each drug when administered independently.

The next step was using chemical modifications to enable bonding between the polymeric carrier and the chosen drugs. This combined system can travel through the body with total safety, inflicting no damage to healthy tissues. Upon reaching the cancer cells, the nanocarrier encounters proteins of the cathepsins enzyme family, which are highly activated in malignant tumors. The proteins degrade the polymer, releasing the drugs which become active and join forces to attack the tumor. Prof. Satchi-Fainaro: “It’s like several passengers riding in one cab and getting off together at the same address. They all arrive at the same destination, right at the same time.”

Promising results

Tested on a mouse model of melanoma, the new treatment showed promising results: The nanocarrier delivered the two drugs to the tumor and released them there simultaneously in quantities about 20 times greater than those that reach the tumor when similar doses of the same medications are administered independently. In addition, the therapeutic effect achieved by the drugs delivered by the nanocarrier lasted much longer – 2-2.5 times compared to control group and the group treated with free medications. According to the researchers, this means that the new platform enables much lower dosages – about one third of the dose required in regular drug cocktails, and the treatment as a whole is both safer and more effective. Also, if needed, the new approach allows for dosages that are much higher than the maximum dosage permissible in current methods, thereby enhancing the effectiveness of the treatment even further.

Prof. Satchi-Fainaro: “In this project, we developed an innovative drug delivery system for treating melanoma, delivering two proven medications and releasing them simultaneously at the tumor site. The treatment proved both safer and more effective than the same medications administered as a cocktail. Moreover, our new platform is highly modular and can be used for delivering a vast range of medications. We believe that its potential for enhancing therapeutics for different diseases is practically endless.”

The study was funded by the Israel Cancer Research Fund (ICRF), the European Research Council (ERC), Israel’s Ministry of Health (EuroNanoMed-II program), the Melanoma Research Alliance, the Morris Kahn 3D BioPrinting for Cancer Research Initiative and the Israel Science Foundation (ISF).

Featured image: Prof. Ronit Satchi-Fainaro

TAU Wins 3M Grant to Accelerate COVID-19 Vaccine Development

Grantee Professor Jonathan Gershoni aims to block the coronavirus by targeting its most vulnerable spot

Science-based technology company 3M has awarded a significant philanthropic research grant of $400,000 (1.36 million NIS) to the Shmunis School of Biomedicine and Cancer Research at Tel Aviv University to advance scientific knowledge in the global response to the COVID-19 pandemic. The grant from 3M, which bases its Israel operations in Herzliya, is part of a $5 million initiative to support research programs with a focus on treatments and vaccine development for COVID-19 at leading educational establishments around the world. TAU secured the funding through an international competitive process; this reflects the high esteem in which the University’s scientific research programs are held. The grant was disbursed via 3M’s grant-making partner, GlobalGiving, to ensure thorough vetting, due diligence and reporting. The research project is being led by Professor Jonathan Gershoni, a renowned expert in viral pathogens, who said: “Publication of the SARS CoV2 genome on January 9, 2020, launched the race for a COVID-19 vaccine. Tens of vaccine candidates have already entered clinical trials, the leaders of which are actively recruiting thousands of volunteers worldwide for phase III efficacy trials. All these efforts use the viral spike protein as their vaccine’s active ingredient. This relatively large protein is made up of 1200 amino acids arranged in groups of three, decorating the virus with a crown-like appearance. “The spike protein presents many targets that have evolved to confuse and distract our immune system and to steer us away from the virus’ most vulnerable soft spot, its receptor-binding motif (RBM). In order for the virus to successfully infect us and cause COVID- 19, it must first latch onto a unique protein, the ACE2 receptor, which is present on the surface of our lung cells. For this, the viral RBM, a tiny but highly complex structure, must detect ACE2, bind to it and mediate infection. A vaccine that exclusively targets the RBM should be extremely potent in affording maximal protection against SARS CoV2 by stimulating our immune system in the most efficient and cost-effective way. “We have developed a novel patented technology to ‘surgically’ isolate the RBM from the rest of the spike protein. This grant from 3M will significantly enhance our efforts to produce a highly focused, potent and especially safe vaccine for COVID 19,” he added. Prof. Gershoni’s Lab team (Photographer: Moshe Bedarshi) This study is anchored in more than 30 years of research on the interaction of RNA viruses with their receptors and the immune response against them, noted Professor Tal Pupko, Head of the Shmunis School at TAU. “The 3M grant will dramatically accelerate the pace of research for overcoming COVID-19,” said Professor Pupko, adding that Tel Aviv University was particularly proud to be included in this important global initiative by 3M. “Science is at the heart of 3M and we are committed to advancing the rapid study of this virus as part of our continued effort to combat the COVID-19 pandemic,” said Isabelle Zadikov-Carp, 3M Israel Country Leader. “It’s important that 3M holds true to its core values by supporting our communities and improving lives. We hope that the grant to TAU will facilitate the development of an effective vaccine and we will be keenly following the progress and outcomes of Professor Gershoni’s research with interest.” Featured image: Professor Jonathan Gershoni (Photographer: Moshe Bedarshi)

TAU Inaugurates Shmunis School of Biomedicine and Cancer Research

School is funded with a generous gift from the Shmunis family for research and improved treatments for cancer, COVID-19, and other diseases Tel Aviv University inaugurated the Shmunis School of Biomedicine and Cancer Research, in the presence of Israel’s Minister of Science and Technology Izhar Shay and benefactors Vlad and Sana Shmunis, online, via RingCentral. The new School, part of the George S. Wise Faculty of Life Sciences will enable a leap in biomedical research.  The School’s 300 researchers, students and staff in the fields of cancer research, cancer immunity, bioinformatics, microbiology, biotechnology, and more, will work to identify mechanisms that drive cancer and other diseases. Moreover, they will develop new pharmaceuticals and improve patients’ quality of life. This will be achieved through multidisciplinary collaborations and novel research approaches, such as single cell sequencing and bioinformatics. Vlad and Sana Shmunis expressed hope that their gift will help strengthen Israel’s standing as a global leader in cancer and molecular biomedical research. “In supporting TAU, we firmly believe that we have found an ideal partner to move the needle towards curing cancer and other terrible diseases,” said Vlad Shmunis, Chief Executive Officer and Founder of RingCentral, Inc. “Cancer is a disease that has unfortunately touched our family and far too many other families.  We hope that our gift to TAU will … improve the lives of people in Israel and around the world.” The new partnership will enable the University to recruit the finest researchers and award the annual Shmunis Fellowships to exceptional PhD students. The School will also collaborate with leading academic institutions and host Shmunis Visiting Scholars and international conferences.

Recent Shmunis School achievements:

  • The Gershoni Lab was awarded a US patent for a novel vaccine against the coronavirus
  • The Stern Lab‘s genetic sequencing of the coronavirus tracked the spread of COVID-19 in Israel
  • The Ehrlic Lab is developing virus-based immunotherapies for cancer ​
  • The Lederkremer Lab developed a therapeutic approach for Huntington’s disease, for which no treatment exists
“I am grateful to the Shmunis family for their important and generous gift,” said Prof. Ariel Porat, President of Tel Aviv University. “Meeting high standards of other renowned centers for cancer research around the globe, the School will be a hub for the brightest Israeli and international researchers to join as faculty.” This is the Shmunis family’s second major donation to the University. They founded the Shmunis Family Anthropology Institute in 2018 dedicated to the study of the ancient past. The Institute conducts numerous cutting-edge research projects in anthropology and archaeology on campus, helping to shed light on the origins of humankind. Featured image: Prof. Ariel Porat, TAU President, and Prof. Tal Pupko, head of the Shmunis School, at the Shmunis School Inauguration Ceremony. Photo: Chen Galili.

How the parents’ environment impacts the lives of their offspring

Three rules that dictate transgenerational epigenetic inheritance in worms – independently of changes in DNA sequences.

Researchers at Tel Aviv University have discovered three rules that dictate epigenetic inheritance – meaning transgenerational inheritance through means other than changes in DNA sequences. Published today in the leading scientific journal Cell, the study was led by Prof. Oded Rechavi and his research student Dr. Leah Houri-Zeevi of the Department of Neurobiology at the Faculty of Life Sciences and the Sagol School of Neuroscience at Tel Aviv University.

Most experiences we acquire in our lifetime will not be passed on to our descendants. For example, our workout in the gym today will not make our children stronger. However, studies conducted in recent years on epigenetic inheritance in worms challenge our traditional concepts regarding the limits of inheritance and evolution, indicating that some acquired traits are in fact passed on to subsequent generations. Prof. Rechavi explains: “Epigenetic inheritance of responses to the environment occurs independently of changes to the DNA sequence, through other inherited molecules. In many organisms, responses to environmental changes, such as stress, involve small RNA molecules that silence or block the expression of certain genes.” In recent years, research on C. elegans worms – an important and widely used model animal – has shown that small RNA molecules can be transmitted to subsequent generations, thereby passing on certain traits.

In previous research projects, Prof. Rechavi discovered that worms transfer to their offspring small RNA molecules containing information on the parent’s environment, such as viral infections, nutrition, and even brain activity, thereby contributing to the survival of subsequent generations. In the current study, Prof. Rechavi and his team tried to understand whether transgenerational epigenetic inheritance via small RNA molecules is governed by specific rules, or alternately, occurs passively and randomly.

According to Prof. Rechavi, “C. elegans is the preferred model organism for research on transgenerational epigenetic inheritance, for several  reasons: Its generation time is three and a half days, allowing us to study many generations in a short period of time; every worm produces hundreds of descendants, providing strong statistical validity; environmental exposure can be fully controlled; and each worm fertilizes itself, so that differences in DNA are almost completely neutralized.”

Dr. Houri-Zeevi explains that “Many laboratories have noted that at the level of a population epigenetic inheritance through small RNA endures for about three to five generations in worms. In a previous study, we discovered a mechanism that controls the duration of the inheritance, proving, in effect, that this type of inheritance is a regulated process. But still the question remains: Why are some worms strongly affected by their ancestor’s environmental responses, while others do not inherit the epigenetic effect at all – despite the fact that all offspring are almost identical genetically. This partial inheritance has been known for some time, but how epigenetic material is distributed among the offspring remained a mystery. We wanted to find out whether there was any pattern in the inheritance, that might explain and allow us to predict who would inherit the epigenetic features – and for how long.”

The researchers used a genetically engineered worm carrying a gene that produces a fluorescent protein – making the worm itself glow under fluorescent light. The researchers then initiated a heritable small RNA silencing response against the fluorescent gene and observed which descendants had inherited the silencing response and stopped glowing, and which descendants ‘forgot’ the parental response and started expressing the fluorescent gene once again after several generations. Dr. Houri-Zeevi repeated this process over and over again, in an attempt to understand the rules governing the epigenetic effect. Altogether she examined dozens of worms lineages, including more than 20,000 individual worms. But the most challenging part, according to Prof. Rechavi, was deciphering the different inheritance patterns and understanding the rules behind them.

Ultimately, through in-depth investigation of the inheritance mechanism, the researchers discovered three laws that can explain and even enable the prediction of who inherits the epigenetic information:

  • First law: Inheritance is uniform in worms descending from the same mother – namely worms of the same lineage. The researchers were surprised to learn that differences in inheritance observed in previous studies were in fact ‘concealed’ due to the method of examining whole worm populations rather than distinct lineages.
  • Second law: Inheritance is very different in worms derived from different mothers, even though the mothers themselves are supposedly identical, because the worm fertilizes itself. The researchers characterized the mechanism that creates the differences between mothers who are genetically identical and found that differences between descendants stem from varying ‘internal states’ randomly adopted by the mothers. Essentially, the mother’s internal state, the level of activity of the inheritance mechanism in each mother, determines the duration of inheritance, and thus the fate of subsequent generations.
  • Third law: The longer the duration of the epigenetic inheritance – namely, the greater the number of generations in a specific lineage who inherits the trait – the greater the probability that it will continue on to the next generation as well, “in something like transgenerational momentum, resembling the ‘Hot Hand’ rule in basketball.”

According to Prof. Rechavi, we do not yet know whether the exact same transgenerational epigenetic inheritance mechanism exists in humans as well: “We hope that the mechanism we have discovered exists in other organisms as well, but we’ll just have to be patient. We must remember that genetic research also began with Friar Gregor Mendel’s observations in peas, and today we use Mendel’s laws to predict whether our children will have smooth or curly hair.”

“The idea of acquired traits passed on to descendants is as old as it is outrageous. Even before Darwin and Lamarck, the ancient Greeks argued about it, and it seems to be incompatible with genetic inheritance through DNA,” adds Prof. Rechavi. “The worms changed the rules by showing us that inheritance outside the genetic sequence does exist, via small RNA molecules, enabling parents to prepare their offspring for the difficulties they have encountered in their lifetime. From one study to the next we shed light on the molecular mechanisms and mysterious dynamics of epigenetic inheritance, with the present study providing laws and introducing some ‘order into the chaos’.”

Does our Brain like risk?

A new study attempts to find out whether our brains are prone to over caution or to underestimating risk

A new Tel Aviv University study examined the brain’s reactions in conditions of uncertainty and stressful conflict in an environment of risks and opportunities. The researchers identified the areas of the brain responsible for the delicate balance between desiring gain and avoiding potential loss along the way.

The study was led by Tel Aviv University researchers Prof. Talma Hendler, Prof. Itzhak Fried, Dr. Tomer Gazit, and Dr. Tal Gonen from the Sackler Faculty of Medicine, the School of Psychological Sciences and the Sagol School of Neuroscience, along with researchers from the the Tel Aviv Sourasky Medical Center (Ichilov) and the University of California, Los Angeles School of Medicine. The study was published in July 2020 in the prestigious journal Nature Communications.

Prof. Hendler explains that in order to detect reactions in the depths of the brain, the study was performed among a unique population of epilepsy patients who had electrodes inserted into their brains for testing prior to surgery to remove the area of the brain causing epileptic seizures. Patients were asked to play a computer game that included risks and opportunities, and the electrodes allowed the researchers to record, with a high level of accuracy, neural activity in different areas of the brain associated with decision-making, emotion and memory.

Your brain suggests – play it safe

Throughout the game, the researchers recorded the electrical activity in the subjects’ nerve cells immediately after they won or lost money. The subjects were asked to try to collect coins while taking the risk of losing money from their pool. It was found that the neurons in the area of ​​the inner prefrontal cortex responded much more to loss (punishment) than to the gaining (reward) of coins.

Moreover, the researchers found that the avoidance of risk-taking in the players’ next move was affected mainly by post-loss activity in the area of the hippocampus, which is associated with learning and memory, but also with anxiety. This finding demonstrates the close relationship between memory processes and decision-making when risk is present (stressful situations). That is, the loss is encoded in the hippocampus (the region of the brain associated with ​​memory), and the participant operating in a high-risk stressful situation preferred to be cautious and avoid winning the coins (forfeiting the gain).

The experience of winning, however, was not encoded in the memory in a way that influenced the choice of future behavior in conditions of uncertainty. An interesting point is that this phenomenon was found only when the subject was the once influencing the result of the game, and only in the presence of a high risk in the next move, which indicates a possible connection to anxiety.

Prof. Hendler summarizes: “Throughout life, we ​​learn to balance the fear of risking loss with the pursuit of profit, and we learn what is a reasonable risk to take in relation to the gain based on previous experiences. The balance between these two tendencies is a personality trait but is also affected by stress (like the current pandemic). A disorder in this trait increase sensitivity to stress and can cause non-adaptive behavior such as a high propensity for risk-taking or excessive avoidance.

“Our research shows for the first time how the human brain is affected by the experience of failure or loss when it is our responsibility, and how this inclination produces avoidance behavior under particularly stressful uncertainty. An understanding of the neural mechanism involved may guide future neuropsychiatric therapies for disorders featuring excessive avoidance, such as depression, anxiety, and PTSD, or disorders associated with excessive risk-taking, such as addiction and mania.”

Featured image: Prof. Talma Hendler

Physical exercise can help improve both physical and mental health

Participating in online sports programs during the COVID-19 pandemic improves adolescents’ psychological resilience

Researchers at Tel Aviv University have examined the connection between adolescents’ mental resilience and their participation in sports programs during the coronavirus pandemic. The researchers found that adolescents who continued to work out in a group context during the lockdown were more mentally resilient than their peers – even though the practice sessions were conducted online. The study – the only one of its kind in the world to focus on adolescents – was conducted by Dr. Keren Constantini, Irit Marcus, Dr. Naomi Apple, Dr. Ronit Jakobovitch, Dr. Iftach Gafner and Dr. Shahar Lev-Ari, and its results were presented at a joint conference of the Schools of Public Health Organization, the Israel Association of Public Health Physicians and the Sports Physicians Association.

“We conducted the study during the general lockdown,” says Dr. Lev-Ari, Head of the Department of Health Promotion at Tel Aviv University. “Some organizations and gyms had suspended their sports programs, but others – like the educational sports organization Chamesh Etzbaot (Five Fingers), adopted an online format, mostly through Zoom. We were interested in checking whether online activities helped build adolescents’ physical and mental resilience. To do this we compared two groups: adolescents who continued to practice in an online group context, and their peers who exercised on their own during the lockdown.”

For this purpose, Dr. Lev-Ari and his team conducted an online survey designed to test resilience levels, health behaviors and risk perceptions of 473 adolescents who had been enrolled in organized sports programs before the coronavirus outbreak. Their findings were statistically significant: Adolescents who continued to participate in sports programs through an online format during the lockdown actually practiced more, and consequently exhibited higher levels of resilience, had better self-esteem and higher morale, and expressed fewer concerns about the pandemic.

“We found that adolescents who continued to take part in their sports programs through the internet practiced more – 242 minutes of practice per week vs. only 191 minutes for adolescents who worked out on their own,” explains Dr. Lev-Ari. “But this only accounts for the physical resilience. In addition, there is the aspect of mental resilience: a person’s ability to cope with difficulties, burdens and stress. This has to do with an element of personal endurance that stems from personality, as well as various acquired elements – like the size of the ‘battery’ I have for withstanding pressure, and how quickly I can recharge it.”

To test the adolescents’ mental resilience, the researchers compared the results of those who practiced in an online group with the results of those who continued to work out on their own during the lockdown, based on validated questionnaires such as the Connor-Davidson Resilience Scale.  These questionnaires include statements like “I tend to bounce back easily from illness or difficulty”, “I don’t despair easily when I fail” and “I see the amusing side of things” – with each respondent ranking how true the statement is for him/her on the given scale.

“The results were unequivocal, in all measures,” says Dr. Lev-Ari. “The adolescents who continued their sports program exhibited higher spirits, less anxiety about themselves and their families, and  lower levels of stress – even though their practice sessions continued through Zoom. Moreover, these adolescents were more aware of the importance of organized sports, especially at this time. 84% of the adolescents who participated in sports said that the continued practice sessions helped them cope with negative feelings and low spirits during the lockdown; 55% indicated that their contact with the coach served as a meaningful source of support. Our study proves the importance of continued activities in organized sports programs in these challenging times of the COVID-19 pandemic, and similar conclusions can certainly be deduced with regard to other social organizations as well, such as youth movements.”

Pharmaceutical residuals pose a serious threat to Marine life

A study by Tel Aviv University reveals worrying evidence of environmental contamination

A study led by Prof. Noa Shenkar and graduate student Gal Navon, from the Tel Aviv University (TAU) School of Zoology and the Steinhardt Museum of Natural History, has found significant concentrations of residual pharmaceuticals at 11 sampled sites along the Israeli coastline. These substances have been found in ascidians – marine, filter-feeding, sessile invertebrates. This study was conducted with the participation of the Hydrochemistry Lab of the Water Research Center of the Porter School of the Environment and Earth Sciences, Raymond & Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, headed by Prof. Dror Avisar. The study was published in the journal “Marine Pollution Bulletin”, in August 2020. The study involved sampling of ascidians from 9 different sites along the Mediterranean coastline (Achziv, Acre, Haifa Marina, Sdot Yam, Hadera power station, Acadia beach in Herzliya, HaSela beach in Bat-Yam, Ashdod Marina and Ashkelon Marina) and 2 different Red Sea sites (Eilat Marina and Dolphin Reef). Ascidians are marine invertebrates, few centimetres in size that attach to hard surfaces – such as rocks, peers or breakwaters. Since ascidians feed on small particles found in the water, large quantities of particles from the marine environment accumulate in their bodies over time – including different pollutants. The researchers have performed chemical analysis of the collected ascidians, searching for active compounds of three frequently used pharmaceuticals: Bezafibrate, which reduces blood lipids content; Carbamazepine, an antiepileptic, and mood stabilizer; and Diclofenac, an anti-inflammatory agent present in the well-known medicine Voltaren. These three substances are extremely durable, are hardly degraded by sewage treatment facilities, and last long in the marine environment. The findings are extremely worrisome: in 10 out of 11 sampled sites significant concentrations of the tested pharmaceuticals have been found.
  • All three substances have been detected at 4 of the tested sites (Ashdod, Ashkelon, Sdot Yam and Haifa).
  • Residuals of two of the pharmaceuticals have been detected at 5 of the tested sites (Achziv, Acre, Herzliya, Bat-Yam and the Eilat Marina).
  • One site – Eilat Dolphin Reef, has shown signs of one pharmaceutical only – Diclofenac, though at a concerning concentration
  • Ascidians collected from deep water at the Hadera power station were the only ones to show no traces of pharmaceuticals.
  • Especially high concentrations of Diclofenac and Bezafibrate were found in Acre, Ashdod and Ashkelon.
  Did they take their medicine today? Ascidians Prof. Shenkar and the researcher Gal Navon explain that various pharmaceuticals consumed by humans are not fully metabolized in the body, and high percentage of their active compounds are later excreted in their original form. In addition, lack of public awareness often results in the disposal of unused drugs in toilets or home garbage bins. Currently existing sewage treatment facilities are not suitable for the treatment of medication residuals, and, unlike other pollutants, their final concentrations at the endpoint of sewage treatment are not monitored. Eventually, a substantial amount of pharmaceuticals is discharged into the sea by sewage water. According to the research team, a variety of pharmaceutical residuals can be found in marine ecosystems worldwide – antibiotics, anti-inflammatory drugs, analgesics, anti-depressants and many more. “Many of these compounds are very stable”, the researchers say, “These take a long time to degrade in the marine environment, and the damage they cause to marine life could be extremely excessive, since these pharmaceuticals are designed to affect biological systems (the human body). For example, various studies performed in different sites around the world have shown that Estrogen, present in birth control pills, leads to the development of female features in male fish in certain species, thus damaging their fertility; Prozac triggers increased aggressiveness and risk-taking in crustaceans; anti-depressants impair memory and learning in cuttlefish, and more”. Prof. Avisar: “We have been studying the chemo-physical fate of drug residuals in groundwater and surface water for the past 15 years, and their detection in marine ecosystems has been surprising. The results indicate a chronic large-scale pharmaceutical residuals contamination, as well as the absorption of micro- and nano-pollutants, measured at very low concentrations in marine organisms”. “Our study shows that Israel is no stranger to the global serious issue of seawater pharmaceutical contamination.”, Prof. Shenkar concludes. “The medications we use end up in the sea, mainly through sewage discharge, and cause great damage to the marine environment, indirectly affecting humans, who feed on sea foods that are exposed to such contamination. There are different ways to tackle this problem: on the individual level, we recommend that the population as a whole takes personal responsibility, disposing of unused pharmaceuticals into designated containers – which can be found at pharmacies and health maintenance organizations’ facilities. In addition, we are working to expand research on monitoring pharmaceutical contamination along the Israeli coastline, using advanced analysis of a greater variety of widely used medication, while examining the changes exerted upon the various organisms exposed to the environmental concentrations of those pharmaceuticals”.

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